Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173900Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
aacs
Uncharacterized protein.
 
     0.951
hsdl2
SCP2 domain-containing protein.
  
 
 0.684
cs
Citrate synthase; Belongs to the citrate synthase family.
  
 0.653
sqle
Squalene monooxygenase.
  
 
 0.509
LOC103186924
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.500
adhfe1
Fe-ADH domain-containing protein.
    
 0.486
glud1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.483
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
  
   0.482
rpp14
Uncharacterized protein.
  
 
 0.479
tmeff2
Uncharacterized protein.
      
 0.473
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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