Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grpel2Uncharacterized protein; Belongs to the GrpE family. (255 aa)    
Predicted Functional Partners:
ENSCMIP00000022559
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 
0.969
timm44
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
   
 0.946
ENSCMIP00000047815
Oxidoreductase-like domain-containing protein.
    
 
 0.925
dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.922
hspa9
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.909
ndufaf5
Methyltransf_11 domain-containing protein.
    
   0.894
pam16
Uncharacterized protein.
   
 0.891
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.850
timm17a
Uncharacterized protein.
   
 
 0.849
hspd1
Uncharacterized protein; Belongs to the chaperonin (HSP60) family.
  
 0.838
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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