STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcuMitochondrial calcium uniporter. (344 aa)    
Predicted Functional Partners:
micu1
Uncharacterized protein.
    
 0.939
smdt1
Uncharacterized protein.
    
 0.938
micu2
Uncharacterized protein.
    
 0.866
micu3
Uncharacterized protein.
     
 0.784
phb2
Prohibitin.
     
 0.684
spg7
AAA domain-containing protein.
     
 0.641
phb
Prohibitin.
     
 0.621
afg3l2
AAA domain-containing protein.
 
   
 0.558
LOC103176003
AAA domain-containing protein.
 
   
 0.558
yme1l1
AAA domain-containing protein.
 
   
 0.455
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.