Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005158Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
aipl1
Uncharacterized protein.
    
 0.507
LOC103173600
CS domain-containing protein.
    
 0.454
aarsd1
Uncharacterized protein.
    
 0.454
ENSCMIP00000035187
CS domain-containing protein.
    
 0.454
arntl
Uncharacterized protein.
   
 0.438
ENSCMIP00000003050
DUF1518 domain-containing protein.
   
 0.438
Ncoa2
Uncharacterized protein.
   
 0.438
ENSCMIP00000003072
Uncharacterized protein.
   
 0.438
arnt2
Uncharacterized protein.
   
 0.438
clock
Uncharacterized protein.
   
 0.438
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.