STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005239PH domain-containing protein. (71 aa)    
Predicted Functional Partners:
cds1
Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.
     
 0.904
selenoi
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
chpt1
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.900
pld4
Uncharacterized protein.
     
 0.900
pld2
Phospholipase.
     
  0.900
lpl
Lipoprotein lipase-like protein.
     
  0.900
LOC103183499
PLAT domain-containing protein.
     
  0.900
cept1
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
gpd2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.851
gnpat
PlsC domain-containing protein; Belongs to the GPAT/DAPAT family.
     
 0.813
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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