STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172650IKBKB_SDD domain-containing protein. (253 aa)    
Predicted Functional Partners:
nfkbia
ANK_REP_REGION domain-containing protein.
    
 0.883
map3k14
Protein kinase domain-containing protein.
   
 0.798
sting1
Uncharacterized protein.
   
 0.793
optn
Optineurin.
   
 0.776
map3k7
Protein kinase domain-containing protein.
   
 0.776
traf6
TNF receptor-associated factor.
   
 0.770
mib2
Uncharacterized protein.
    
 0.744
LOC103174124
ANK_REP_REGION domain-containing protein.
    
 0.696
map3k20
Mitogen-activated protein kinase kinase kinase MLT-like protein.
   
 0.695
LOC103182230
Uncharacterized protein.
   
 0.676
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.