Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXCL8Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (99 aa)    
Predicted Functional Partners:
ENSCMIP00000012771
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.689
ENSCMIP00000027449
Uncharacterized protein.
   
 0.689
LOC103190409
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.689
LOC103182147
Interleukin 8.
   
 
  0.581
ccl27
SCY domain-containing protein.
    
 0.560
ccr10
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.560
cxcl12
Uncharacterized protein.
   
 0.545
V9KMB5_CALMI
CXCL12.
   
 0.545
cxcl14
C-X-C motif chemokine 14.
    
 
 0.528
ENSCMIP00000000327
Uncharacterized protein.
  
 
  0.499
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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