STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103177360Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (99 aa)    
Predicted Functional Partners:
ccl27
SCY domain-containing protein.
    
 0.707
ENSCMIP00000000327
Uncharacterized protein.
  
  
  0.496
LOC103191009
C-C motif chemokine.
   
 0.496
LOC103191010
C-C motif chemokine.
   
 0.496
cxcl12
Uncharacterized protein.
   
 
 0.480
V9KMB5_CALMI
CXCL12.
   
 
 0.480
LOC103180826
C-C chemokine receptor type 11-like protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.439
LOC103185998
Interferon induced transmembrane protein 3.
  
    0.422
ENSCMIP00000017500
Uncharacterized protein.
  
    0.416
ENSCMIP00000023601
Uncharacterized protein.
  
    0.408
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.