STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaUncharacterized protein. (337 aa)    
Predicted Functional Partners:
ENSCMIP00000004288
Uncharacterized protein.
 
      0.610
polr3g
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
      
 0.548
asns
Asparagine synthetase (Glutamine-hydrolyzing)-like protein.
     
 0.510
asnsd1
Glutamine amidotransferase type-2 domain-containing protein.
     
 0.510
Rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
 
      0.451
ggct
Uncharacterized protein.
      
 0.412
LOC103173002
Uncharacterized protein.
 
      0.409
otc
Ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
 0.409
nsun5
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.407
asl
Argininosuccinate lyase.
     
 0.406
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.