Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005430Uncharacterized protein. (809 aa)    
Predicted Functional Partners:
fig4
SAC domain-containing protein.
      
 0.909
Litaf
LITAF domain-containing protein.
   
  
 0.742
Ap5s1
Uncharacterized protein.
      
 0.740
sh3tc1
Uncharacterized protein.
      
 0.684
zbtb3
Uncharacterized protein.
      
 0.670
sbf1
Uncharacterized protein.
      
 0.668
sbf2
Uncharacterized protein.
      
 0.668
gdap1
Ganglioside-induced differentiation-associated protein 1-like protein; Belongs to the GST superfamily.
      
 0.667
znf367
Uncharacterized protein.
      
 0.666
kansl2
Uncharacterized protein.
      
 0.623
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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