Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005460Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.897
tasp1
Uncharacterized protein.
   
  
 0.780
cops2
PCI domain-containing protein.
   
  0.722
cops5
MPN domain-containing protein.
    
  0.718
cops3
PCI domain-containing protein.
    
  0.718
kif16b
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.689
cops4
PCI domain-containing protein.
    
  0.686
cops8
COP9 signalosome complex subunit 8.
    
  0.670
ENSCMIP00000032390
Uncharacterized protein.
      
 0.654
LOC103190560
BTB domain-containing protein.
    
  0.636
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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