STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005477Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
depdc5
DEP domain-containing protein.
    
 0.971
nprl2
Uncharacterized protein.
    
 0.971
wdr59
Uncharacterized protein.
    
 0.966
mios
Zinc_ribbon_16 domain-containing protein.
    
 0.955
ENSCMIP00000000249
Uncharacterized protein.
    
 0.949
szt2
Uncharacterized protein.
    
 0.929
LOC103177256
Uncharacterized protein.
    
 0.928
sec13
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.861
lamp1
Lysosome-associated membrane glycoprotein 1-like protein.
    
 
 0.857
ENSCMIP00000009815
WD_REPEATS_REGION domain-containing protein.
    
 0.824
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.