Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103183633Rab-GAP TBC domain-containing protein. (440 aa)    
Predicted Functional Partners:
rab1a
Uncharacterized protein.
    
 0.852
ENSCMIP00000005545
Uncharacterized protein.
    
 0.605
Rab33b
Uncharacterized protein.
    
 0.605
rab19
Ras-related protein Rab-19.
    
 0.588
rab43
Uncharacterized protein.
    
 0.588
rab3gap2
Uncharacterized protein.
      
 0.568
ENSCMIP00000014657
Uncharacterized protein.
    
 0.553
cgnl1
Uncharacterized protein.
    
 0.553
stx5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
     
  0.538
ciao3
Fe_hyd_SSU domain-containing protein; Belongs to the NARF family.
   
  
 0.514
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.