Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tm9sf3Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (581 aa)    
Predicted Functional Partners:
Smim7
Uncharacterized protein.
      
 0.875
casc4
Uncharacterized protein.
   
  
 0.803
cers1
TLC domain-containing protein.
 
      0.712
zfpl1
Uncharacterized protein.
      
 0.692
vti1a
t-SNARE coiled-coil homology domain-containing protein.
      
 0.692
vti1b
t-SNARE coiled-coil homology domain-containing protein.
      
 0.673
ccdc186
Uncharacterized protein.
      
 0.637
asb8
Uncharacterized protein.
      
 0.610
yipf3
Uncharacterized protein.
   
   0.581
gramd1c
VASt domain-containing protein.
      
 0.577
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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