STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172132Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
ENSCMIP00000000835
BTB domain-containing protein.
 
      0.899
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.787
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.565
rbx1
RING-type domain-containing protein.
    
 0.553
nanp
Uncharacterized protein.
   
 
 0.543
bbs9
Uncharacterized protein.
    
 0.509
rsph3
Radial spoke 3-like protein.
   
   0.505
mad2l2
HORMA domain-containing protein.
    
   0.499
uba3
Ubiquitin-activating enzyme 3.
     
 0.482
ubxn7
UBX domain-containing protein 7.
    
  0.476
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.