STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccnb3Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (420 aa)    
Predicted Functional Partners:
cdk1
Cyclin-dependent kinase 1-like protein; Belongs to the protein kinase superfamily.
   
 0.972
cdc27
Uncharacterized protein.
   
 0.928
fzr1
WD_REPEATS_REGION domain-containing protein.
   
 0.922
LOC103182756
Fizzy-related protein-like protein.
   
 0.922
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.920
gadd45g
Growth arrest and DNA-damage-inducible, gamma.
    
 0.914
gadd45b
Ribosomal_L7Ae domain-containing protein.
    
 0.903
Gadd45a
Ribosomal_L7Ae domain-containing protein.
    
 0.902
cdc23
TPR_REGION domain-containing protein.
   
 0.900
cdc16
TPR_REGION domain-containing protein.
   
 0.857
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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