STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpy30Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
ash2l
B30.2/SPRY domain-containing protein.
    
 0.997
rbbp5
WD_REPEATS_REGION domain-containing protein.
    
 0.997
wdr5
WD repeat-containing protein 5-like protein.
   
 0.977
ENSCMIP00000002703
Uncharacterized protein.
    
 
 0.924
dido1
Uncharacterized protein.
    
 
 0.924
uba52
Ribosomal protein L40-like isoform 1.
   
   0.912
rps27a
Ubiquitin-like domain-containing protein.
    
   0.903
wdr82
WD repeat-containing protein 82.
   
 0.892
lrguk
Guanylate kinase-like domain-containing protein.
   
 
 0.890
Setd1b
N-SET domain-containing protein.
    
 0.860
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.