cacna1g protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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[Homology]

Score

cacna1g

Uncharacterized protein. (2288 aa)

Predicted Functional Partners:

LOC103190512

0.902

catsper2

0.811

catsperb

0.804

catsper3

0.790

Catsperd

0.781

cacna1e

0.715

catsperg

0.713

catspere

0.674

ryr3

0.657

cacna2d3

0.650

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Catsperd	LOC103190512	ENSCMIP00000020870	ENSCMIP00000032851	Uncharacterized protein.	Uncharacterized protein.	0.781
Catsperd	cacna1e	ENSCMIP00000020870	ENSCMIP00000006026	Uncharacterized protein.	Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.	0.653
Catsperd	cacna1g	ENSCMIP00000020870	ENSCMIP00000005639	Uncharacterized protein.	Uncharacterized protein.	0.781
Catsperd	cacna2d3	ENSCMIP00000020870	ENSCMIP00000008529	Uncharacterized protein.	VWFA domain-containing protein.	0.565
Catsperd	catsper2	ENSCMIP00000020870	ENSCMIP00000004856	Uncharacterized protein.	Ion_trans domain-containing protein.	0.983
Catsperd	catsper3	ENSCMIP00000020870	ENSCMIP00000012760	Uncharacterized protein.	Ion_trans domain-containing protein.	0.986
Catsperd	catsperb	ENSCMIP00000020870	ENSCMIP00000030018	Uncharacterized protein.	Uncharacterized protein.	0.993
Catsperd	catspere	ENSCMIP00000020870	ENSCMIP00000006357	Uncharacterized protein.	Uncharacterized protein.	0.858
Catsperd	catsperg	ENSCMIP00000020870	ENSCMIP00000006201	Uncharacterized protein.	Uncharacterized protein.	0.980
LOC103190512	Catsperd	ENSCMIP00000032851	ENSCMIP00000020870	Uncharacterized protein.	Uncharacterized protein.	0.781
LOC103190512	cacna1e	ENSCMIP00000032851	ENSCMIP00000006026	Uncharacterized protein.	Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.	0.608
LOC103190512	cacna1g	ENSCMIP00000032851	ENSCMIP00000005639	Uncharacterized protein.	Uncharacterized protein.	0.902
LOC103190512	cacna2d3	ENSCMIP00000032851	ENSCMIP00000008529	Uncharacterized protein.	VWFA domain-containing protein.	0.650
LOC103190512	catsper2	ENSCMIP00000032851	ENSCMIP00000004856	Uncharacterized protein.	Ion_trans domain-containing protein.	0.811
LOC103190512	catsper3	ENSCMIP00000032851	ENSCMIP00000012760	Uncharacterized protein.	Ion_trans domain-containing protein.	0.804
LOC103190512	catsperb	ENSCMIP00000032851	ENSCMIP00000030018	Uncharacterized protein.	Uncharacterized protein.	0.804
LOC103190512	catspere	ENSCMIP00000032851	ENSCMIP00000006357	Uncharacterized protein.	Uncharacterized protein.	0.674
LOC103190512	catsperg	ENSCMIP00000032851	ENSCMIP00000006201	Uncharacterized protein.	Uncharacterized protein.	0.713
cacna1e	Catsperd	ENSCMIP00000006026	ENSCMIP00000020870	Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.	Uncharacterized protein.	0.653
cacna1e	LOC103190512	ENSCMIP00000006026	ENSCMIP00000032851	Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.	Uncharacterized protein.	0.608