STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pde5aPhosphodiesterase. (845 aa)    
Predicted Functional Partners:
guk1
Guanylate kinase.
   
 
 0.903
gmps
Uncharacterized protein.
     
 0.900
hprt1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
cant1
Soluble calcium-activated nucleotidase 1.
     
 0.855
ENSCMIP00000001296
Uncharacterized protein.
   
 0.829
LOC103187614
Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.829
gucy1b1
Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.829
LOC103172259
Guanylate cyclase domain-containing protein.
    
 0.815
aldh7a1
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
      
 0.805
entpd6
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
   
 
 0.800
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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