Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgap5Uncharacterized protein. (1497 aa)    
Predicted Functional Partners:
rhoc
Uncharacterized protein.
    
 0.972
rhoa
Uncharacterized protein.
    
 0.972
rasa1
Uncharacterized protein.
   
 0.919
arhgap35
Uncharacterized protein.
  
  
 
0.901
ENSCMIP00000003261
Uncharacterized protein.
    
 0.758
rnd3
Rho-related GTP-binding protein RhoE-like protein.
    
 0.758
ENSCMIP00000036907
Uncharacterized protein.
    
 0.740
cdc42
Cell division control protein 42-like protein.
    
 0.729
Rnd2
Uncharacterized protein.
    
 0.702
rhof
Rho-related GTP-binding protein RhoF-like protein.
    
 0.660
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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