STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1031874324F5 domain-containing protein. (86 aa)    
Predicted Functional Partners:
pdap1
PP28 domain-containing protein.
      
 0.553
Cdv3
Uncharacterized protein.
      
 0.553
hypk
Uncharacterized protein.
   
  
 0.463
rpp40
Uncharacterized protein.
      
 0.461
lrrc57
Uncharacterized protein.
      
 0.459
dap
Uncharacterized protein.
      
 0.457
zfyve19
Uncharacterized protein.
      
 0.430
ENSCMIP00000042064
Uncharacterized protein.
   
    0.404
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.