STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172139Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
ENSCMIP00000003930
Uncharacterized protein.
 
 
 0.934
LOC103173682
LAM_G_DOMAIN domain-containing protein.
 
  
0.908
dag1
Peptidase S72 domain-containing protein.
   
 0.879
sdc1
4.1m domain-containing protein.
     
 0.628
lrit3
Ig-like domain-containing protein.
    
 0.619
rps27a
Ubiquitin-like domain-containing protein.
    
  0.618
rpl23a
60S ribosomal protein L23a-like protein; Belongs to the universal ribosomal protein uL23 family.
    
 0.617
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.600
rpl14
Ribosomal_L14e domain-containing protein.
    
  0.594
rpl26l1
Ribosomal protein L26 isoform 1.
    
  0.593
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.