Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nubplUncharacterized protein. (385 aa)    
Predicted Functional Partners:
LOC103172197
SF4 helicase domain-containing protein.
    
 
 0.898
Ndufs8
4Fe-4S ferredoxin-type domain-containing protein.
  
 
 0.837
ENSCMIP00000037909
Complex1_49kDa domain-containing protein.
     
 0.832
ndufs1
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.823
ndufs7
NADH dehydrogenase (Ubiquinone) iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
     
 0.811
ndufs3
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
     
 0.811
ndufv2
NADH dehydrogenase (Ubiquinone) flavoprotein 2, mitochondrial.
     
 0.784
ndufaf7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
     
 0.753
ENSCMIP00000048035
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
     
 0.753
ndufaf2
Mitochondrial mimitin.
     
 0.752
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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