stk3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

stk3

Uncharacterized protein. (497 aa)

Predicted Functional Partners:

sav1

0.971

LOC103190313

0.949

casp3

0.949

LOC103191014

0.935

LOC103177678

0.914

stk4

0.901

ENSCMIP00000004458

0.899

yap1

0.896

Tnik

0.896

wwtr1

0.896

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000004458	stk3	ENSCMIP00000004458	ENSCMIP00000005867	CNH domain-containing protein.	Uncharacterized protein.	0.899
ENSCMIP00000004458	stk4	ENSCMIP00000004458	ENSCMIP00000018140	CNH domain-containing protein.	Uncharacterized protein.	0.898
LOC103177678	LOC103191014	ENSCMIP00000040539	ENSCMIP00000019682	Mps one binder kinase activator-like 1a.	Uncharacterized protein.	0.998
LOC103177678	sav1	ENSCMIP00000040539	ENSCMIP00000027815	Mps one binder kinase activator-like 1a.	Uncharacterized protein.	0.972
LOC103177678	stk3	ENSCMIP00000040539	ENSCMIP00000005867	Mps one binder kinase activator-like 1a.	Uncharacterized protein.	0.914
LOC103177678	stk4	ENSCMIP00000040539	ENSCMIP00000018140	Mps one binder kinase activator-like 1a.	Uncharacterized protein.	0.914
LOC103177678	wwtr1	ENSCMIP00000040539	ENSCMIP00000023714	Mps one binder kinase activator-like 1a.	Uncharacterized protein.	0.726
LOC103177678	yap1	ENSCMIP00000040539	ENSCMIP00000011714	Mps one binder kinase activator-like 1a.	WW domain-containing protein.	0.726
LOC103190313	casp3	ENSCMIP00000014922	ENSCMIP00000034404	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.909
LOC103190313	sav1	ENSCMIP00000014922	ENSCMIP00000027815	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.550
LOC103190313	stk3	ENSCMIP00000014922	ENSCMIP00000005867	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.949
LOC103190313	stk4	ENSCMIP00000014922	ENSCMIP00000018140	CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.	Uncharacterized protein.	0.949
LOC103191014	LOC103177678	ENSCMIP00000019682	ENSCMIP00000040539	Uncharacterized protein.	Mps one binder kinase activator-like 1a.	0.998
LOC103191014	sav1	ENSCMIP00000019682	ENSCMIP00000027815	Uncharacterized protein.	Uncharacterized protein.	0.981
LOC103191014	stk3	ENSCMIP00000019682	ENSCMIP00000005867	Uncharacterized protein.	Uncharacterized protein.	0.935
LOC103191014	stk4	ENSCMIP00000019682	ENSCMIP00000018140	Uncharacterized protein.	Uncharacterized protein.	0.935
LOC103191014	wwtr1	ENSCMIP00000019682	ENSCMIP00000023714	Uncharacterized protein.	Uncharacterized protein.	0.748
LOC103191014	yap1	ENSCMIP00000019682	ENSCMIP00000011714	Uncharacterized protein.	WW domain-containing protein.	0.748
Tnik	stk3	ENSCMIP00000016406	ENSCMIP00000005867	CNH domain-containing protein.	Uncharacterized protein.	0.896
Tnik	stk4	ENSCMIP00000016406	ENSCMIP00000018140	CNH domain-containing protein.	Uncharacterized protein.	0.893