STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103172724Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
rsph14
Rhabdoid tumor deletion region protein 1.
    
 
 0.496
cfap161
Uncharacterized protein.
   
 0.467
ENSCMIP00000002406
Uncharacterized protein.
 
     0.454
ccdc146
Uncharacterized protein.
    
 0.445
ENSCMIP00000000075
Uncharacterized protein.
    
 0.439
cfap52
WD repeat domain 16.
   
 0.427
tsnaxip1
TSNAXIP1_N domain-containing protein.
   
 0.422
ccdc65
NYD-SP28 domain-containing protein.
   
 
 0.417
spata18
MIEAP domain-containing protein.
      
 0.405
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.