Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000005978BTB domain-containing protein. (66 aa)    
Predicted Functional Partners:
LOC103183084
POU domain protein.
    
 0.549
polr2c
RPOLD domain-containing protein.
    
 0.520
ENSCMIP00000002464
B30.2/SPRY domain-containing protein.
  
 
  0.481
ENSCMIP00000006144
Uncharacterized protein.
  
   
 0.452
mysm1
Uncharacterized protein.
    
 0.430
LOC103174270
B30.2/SPRY domain-containing protein.
  
 
  0.424
ENSCMIP00000005060
NDK domain-containing protein; Belongs to the NDK family.
    
 0.420
LOC103187939
Uncharacterized protein; Belongs to the NDK family.
    
 0.420
ENSCMIP00000008483
B30.2/SPRY domain-containing protein.
  
 
  0.418
LOC103172153
B30.2/SPRY domain-containing protein.
  
 
  0.414
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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