Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
vps26cDown syndrome critical region protein 3. (297 aa)    
Predicted Functional Partners:
ccdc93
KOG2701 domain-containing protein.
    
 
 0.991
ccdc22
Uncharacterized protein.
   
 
 0.990
vps29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.988
commd2
COMM domain-containing protein.
    
 
 0.987
ENSCMIP00000010377
COMM domain-containing protein.
    
 
 0.986
dennd10
UDENN domain-containing protein.
    
 
 0.986
commd1
COMM domain-containing protein.
    
 
 0.985
K4FUG7_CALMI
COMM domain-containing protein 3.
    
 
 0.985
vps35l
Uncharacterized protein.
   
 
 0.985
commd4
COMM domain-containing protein 4-like protein.
    
 
 0.983
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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