vps26c protein (Callorhinchus milii) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

vps26c

Down syndrome critical region protein 3. (297 aa)

Predicted Functional Partners:

vps29

0.854

ccdc22

0.831

Arrdc5

0.825

ccdc93

0.813

commd2

0.772

vps35l

0.770

commd4

0.758

ENSCMIP00000010377

0.752

K4FUG7_CALMI

0.747

commd1

0.740

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arrdc5	vps26c	ENSCMIP00000047384	ENSCMIP00000005983	Arrestin_C domain-containing protein.	Down syndrome critical region protein 3.	0.825
ENSCMIP00000010377	K4FUG7_CALMI	ENSCMIP00000010377	ENSCMIP00000007114	COMM domain-containing protein.	COMM domain-containing protein 3.	0.926
ENSCMIP00000010377	ccdc22	ENSCMIP00000010377	ENSCMIP00000036310	COMM domain-containing protein.	Uncharacterized protein.	0.906
ENSCMIP00000010377	ccdc93	ENSCMIP00000010377	ENSCMIP00000015721	COMM domain-containing protein.	KOG2701 domain-containing protein.	0.807
ENSCMIP00000010377	commd1	ENSCMIP00000010377	ENSCMIP00000003889	COMM domain-containing protein.	COMM domain-containing protein.	0.941
ENSCMIP00000010377	commd2	ENSCMIP00000010377	ENSCMIP00000023690	COMM domain-containing protein.	COMM domain-containing protein.	0.922
ENSCMIP00000010377	commd4	ENSCMIP00000010377	ENSCMIP00000027565	COMM domain-containing protein.	COMM domain-containing protein 4-like protein.	0.866
ENSCMIP00000010377	vps26c	ENSCMIP00000010377	ENSCMIP00000005983	COMM domain-containing protein.	Down syndrome critical region protein 3.	0.752
ENSCMIP00000010377	vps29	ENSCMIP00000010377	ENSCMIP00000014288	COMM domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.655
ENSCMIP00000010377	vps35l	ENSCMIP00000010377	ENSCMIP00000023774	COMM domain-containing protein.	Uncharacterized protein.	0.800
K4FUG7_CALMI	ENSCMIP00000010377	ENSCMIP00000007114	ENSCMIP00000010377	COMM domain-containing protein 3.	COMM domain-containing protein.	0.926
K4FUG7_CALMI	ccdc22	ENSCMIP00000007114	ENSCMIP00000036310	COMM domain-containing protein 3.	Uncharacterized protein.	0.911
K4FUG7_CALMI	ccdc93	ENSCMIP00000007114	ENSCMIP00000015721	COMM domain-containing protein 3.	KOG2701 domain-containing protein.	0.788
K4FUG7_CALMI	commd1	ENSCMIP00000007114	ENSCMIP00000003889	COMM domain-containing protein 3.	COMM domain-containing protein.	0.892
K4FUG7_CALMI	commd2	ENSCMIP00000007114	ENSCMIP00000023690	COMM domain-containing protein 3.	COMM domain-containing protein.	0.931
K4FUG7_CALMI	commd4	ENSCMIP00000007114	ENSCMIP00000027565	COMM domain-containing protein 3.	COMM domain-containing protein 4-like protein.	0.822
K4FUG7_CALMI	vps26c	ENSCMIP00000007114	ENSCMIP00000005983	COMM domain-containing protein 3.	Down syndrome critical region protein 3.	0.747
K4FUG7_CALMI	vps29	ENSCMIP00000007114	ENSCMIP00000014288	COMM domain-containing protein 3.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.603
K4FUG7_CALMI	vps35l	ENSCMIP00000007114	ENSCMIP00000023774	COMM domain-containing protein 3.	Uncharacterized protein.	0.744
ccdc22	ENSCMIP00000010377	ENSCMIP00000036310	ENSCMIP00000010377	Uncharacterized protein.	COMM domain-containing protein.	0.906