psme3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

psme3

Uncharacterized protein. (202 aa)

Predicted Functional Partners:

psma6

0.981

psma5

0.981

psma3

0.979

LOC103171909

0.975

psma2

0.971

LOC103174436

0.970

psmb3

0.970

psma1

0.967

psmb4

0.965

psmb2

0.965

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103171909	LOC103174436	ENSCMIP00000002415	ENSCMIP00000003447	Proteasome subunit alpha type.	Uncharacterized protein.	0.999
LOC103171909	psma1	ENSCMIP00000002415	ENSCMIP00000034109	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psma2	ENSCMIP00000002415	ENSCMIP00000002462	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psma3	ENSCMIP00000002415	ENSCMIP00000001987	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC103171909	psma5	ENSCMIP00000002415	ENSCMIP00000004740	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC103171909	psma6	ENSCMIP00000002415	ENSCMIP00000003596	Proteasome subunit alpha type.	Proteasome endopeptidase complex.	0.999
LOC103171909	psmb2	ENSCMIP00000002415	ENSCMIP00000012254	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb3	ENSCMIP00000002415	ENSCMIP00000010819	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psmb4	ENSCMIP00000002415	ENSCMIP00000005209	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
LOC103171909	psme3	ENSCMIP00000002415	ENSCMIP00000006039	Proteasome subunit alpha type.	Uncharacterized protein.	0.975
LOC103174436	LOC103171909	ENSCMIP00000003447	ENSCMIP00000002415	Uncharacterized protein.	Proteasome subunit alpha type.	0.999
LOC103174436	psma1	ENSCMIP00000003447	ENSCMIP00000034109	Uncharacterized protein.	Proteasome endopeptidase complex.	0.999
LOC103174436	psma2	ENSCMIP00000003447	ENSCMIP00000002462	Uncharacterized protein.	Proteasome endopeptidase complex.	0.999
LOC103174436	psma3	ENSCMIP00000003447	ENSCMIP00000001987	Uncharacterized protein.	Proteasome subunit alpha type.	0.999
LOC103174436	psma5	ENSCMIP00000003447	ENSCMIP00000004740	Uncharacterized protein.	Proteasome subunit alpha type.	0.999
LOC103174436	psma6	ENSCMIP00000003447	ENSCMIP00000003596	Uncharacterized protein.	Proteasome endopeptidase complex.	0.999
LOC103174436	psmb2	ENSCMIP00000003447	ENSCMIP00000012254	Uncharacterized protein.	Proteasome subunit beta.	0.999
LOC103174436	psmb3	ENSCMIP00000003447	ENSCMIP00000010819	Uncharacterized protein.	Proteasome subunit beta.	0.999
LOC103174436	psmb4	ENSCMIP00000003447	ENSCMIP00000005209	Uncharacterized protein.	Proteasome subunit beta.	0.999
LOC103174436	psme3	ENSCMIP00000003447	ENSCMIP00000006039	Uncharacterized protein.	Uncharacterized protein.	0.970