Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpqPeptidase_M28 domain-containing protein. (491 aa)    
Predicted Functional Partners:
crcp
RPOL4c domain-containing protein.
      
 0.698
laptm4b
Uncharacterized protein.
    
 
 0.693
nt5dc1
Uncharacterized protein.
      
 0.672
Kcns1
BTB domain-containing protein; Belongs to the potassium channel family.
    
 
 0.664
LOC103186861
Uncharacterized protein.
   
  
 0.660
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.656
ccdc152
Uncharacterized protein.
      
 0.651
arg2
Arginase.
   
 
 0.648
LOC103181791
Arginase.
   
 
 0.648
mtdh
Uncharacterized protein.
     
 0.645
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (18%) [HD]