Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ddx51Uncharacterized protein. (568 aa)    
Predicted Functional Partners:
nol8
RRM domain-containing protein.
   
   0.921
ebna1bp2
Uncharacterized protein.
   
 0.855
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.806
nop14
Uncharacterized protein.
   
 0.792
dhx9
Uncharacterized protein.
   
 0.784
rrp9
U3 small nucleolar RNA-interacting protein 2-like protein.
   
 0.738
gpr153
Uncharacterized protein.
   
 0.738
rbm25
Uncharacterized protein.
   
 0.737
rpl4
Ribos_L4_asso_C domain-containing protein.
   
 0.735
wdr61
WD_REPEATS_REGION domain-containing protein.
   
 0.732
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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