Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcrip1Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
dhrs7c
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.889
saysd1
SAYSvFN domain-containing protein.
      
 0.865
dnah8
Uncharacterized protein.
      
 0.744
ddx6
Putative ATP-dependent RNA helicase DDX6-like protein; Belongs to the DEAD box helicase family.
    
 
 0.738
LOC103176370
Uncharacterized protein; Belongs to the peptidase S9B family.
      
 0.698
rcvrn
Uncharacterized protein.
      
 0.676
lsm12
AD domain-containing protein.
    
 
 0.620
prl
Prolactin 2.
      
 0.552
glp2r
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
      
 0.484
ccdc134
Uncharacterized protein.
      
 0.484
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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