nelfe protein (Callorhinchus milii) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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[Homology]

Score

nelfe

Uncharacterized protein. (76 aa)

Predicted Functional Partners:

nelfa

0.999

nelfb

0.999

nelfcd

0.999

ncbp2

0.990

ncbp1

0.989

supt4h1

0.973

supt5h

0.970

LOC103174263

0.967

ighmbp2

0.923

polr2c

0.881

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103174263	ncbp1	ENSCMIP00000001946	ENSCMIP00000016241	Uncharacterized protein.	MIF4G domain-containing protein.	0.725
LOC103174263	ncbp2	ENSCMIP00000001946	ENSCMIP00000019578	Uncharacterized protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.740
LOC103174263	nelfa	ENSCMIP00000001946	ENSCMIP00000008260	Uncharacterized protein.	HDAg domain-containing protein.	0.905
LOC103174263	nelfb	ENSCMIP00000001946	ENSCMIP00000020433	Uncharacterized protein.	Uncharacterized protein.	0.644
LOC103174263	nelfcd	ENSCMIP00000001946	ENSCMIP00000036218	Uncharacterized protein.	Uncharacterized protein.	0.567
LOC103174263	nelfe	ENSCMIP00000001946	ENSCMIP00000006198	Uncharacterized protein.	Uncharacterized protein.	0.967
LOC103174263	polr2c	ENSCMIP00000001946	ENSCMIP00000008812	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
LOC103174263	supt4h1	ENSCMIP00000001946	ENSCMIP00000024699	Uncharacterized protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.954
LOC103174263	supt5h	ENSCMIP00000001946	ENSCMIP00000014467	Uncharacterized protein.	Transcription elongation factor SPT5.	0.995
ighmbp2	nelfa	ENSCMIP00000017871	ENSCMIP00000008260	Uncharacterized protein.	HDAg domain-containing protein.	0.926
ighmbp2	nelfcd	ENSCMIP00000017871	ENSCMIP00000036218	Uncharacterized protein.	Uncharacterized protein.	0.604
ighmbp2	nelfe	ENSCMIP00000017871	ENSCMIP00000006198	Uncharacterized protein.	Uncharacterized protein.	0.923
ncbp1	LOC103174263	ENSCMIP00000016241	ENSCMIP00000001946	MIF4G domain-containing protein.	Uncharacterized protein.	0.725
ncbp1	ncbp2	ENSCMIP00000016241	ENSCMIP00000019578	MIF4G domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
ncbp1	nelfa	ENSCMIP00000016241	ENSCMIP00000008260	MIF4G domain-containing protein.	HDAg domain-containing protein.	0.754
ncbp1	nelfb	ENSCMIP00000016241	ENSCMIP00000020433	MIF4G domain-containing protein.	Uncharacterized protein.	0.985
ncbp1	nelfcd	ENSCMIP00000016241	ENSCMIP00000036218	MIF4G domain-containing protein.	Uncharacterized protein.	0.895
ncbp1	nelfe	ENSCMIP00000016241	ENSCMIP00000006198	MIF4G domain-containing protein.	Uncharacterized protein.	0.989
ncbp1	polr2c	ENSCMIP00000016241	ENSCMIP00000008812	MIF4G domain-containing protein.	RPOLD domain-containing protein.	0.726
ncbp1	supt4h1	ENSCMIP00000016241	ENSCMIP00000024699	MIF4G domain-containing protein.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.765