mterf3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

mterf3

Uncharacterized protein. (415 aa)

Predicted Functional Partners:

ruvbl1

0.832

fastkd2

0.728

mrpl36

0.667

ddx28

0.664

mrpl20

0.659

polrmt

0.633

mterf4

0.619

pink1

0.609

tfb2m

0.607

ptcd1

0.591

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ddx28	fastkd2	ENSCMIP00000045572	ENSCMIP00000012180	Uncharacterized protein.	RAP domain-containing protein.	0.711
ddx28	mrpl20	ENSCMIP00000045572	ENSCMIP00000034801	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.705
ddx28	mterf3	ENSCMIP00000045572	ENSCMIP00000006216	Uncharacterized protein.	Uncharacterized protein.	0.664
ddx28	mterf4	ENSCMIP00000045572	ENSCMIP00000028844	Uncharacterized protein.	mTERF domain-containing protein 2-like protein.	0.456
ddx28	polrmt	ENSCMIP00000045572	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.443
ddx28	ptcd1	ENSCMIP00000045572	ENSCMIP00000042557	Uncharacterized protein.	Uncharacterized protein.	0.491
ddx28	tfb2m	ENSCMIP00000045572	ENSCMIP00000046288	Uncharacterized protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.540
fastkd2	ddx28	ENSCMIP00000012180	ENSCMIP00000045572	RAP domain-containing protein.	Uncharacterized protein.	0.711
fastkd2	mterf3	ENSCMIP00000012180	ENSCMIP00000006216	RAP domain-containing protein.	Uncharacterized protein.	0.728
fastkd2	ptcd1	ENSCMIP00000012180	ENSCMIP00000042557	RAP domain-containing protein.	Uncharacterized protein.	0.693
fastkd2	tfb2m	ENSCMIP00000012180	ENSCMIP00000046288	RAP domain-containing protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.487
mrpl20	ddx28	ENSCMIP00000034801	ENSCMIP00000045572	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.705
mrpl20	mrpl36	ENSCMIP00000034801	ENSCMIP00000039315	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
mrpl20	mterf3	ENSCMIP00000034801	ENSCMIP00000006216	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.659
mrpl20	mterf4	ENSCMIP00000034801	ENSCMIP00000028844	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	mTERF domain-containing protein 2-like protein.	0.569
mrpl36	mrpl20	ENSCMIP00000039315	ENSCMIP00000034801	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
mrpl36	mterf3	ENSCMIP00000039315	ENSCMIP00000006216	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Uncharacterized protein.	0.667
mrpl36	mterf4	ENSCMIP00000039315	ENSCMIP00000028844	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	mTERF domain-containing protein 2-like protein.	0.602
mterf3	ddx28	ENSCMIP00000006216	ENSCMIP00000045572	Uncharacterized protein.	Uncharacterized protein.	0.664
mterf3	fastkd2	ENSCMIP00000006216	ENSCMIP00000012180	Uncharacterized protein.	RAP domain-containing protein.	0.728