mterf3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

mterf3

Uncharacterized protein. (415 aa)

Predicted Functional Partners:

fastkd2

0.975

ptcd1

0.890

trub2

0.876

rcc1l

0.871

ddx28

0.832

ruvbl1

0.832

tfam

0.758

polrmt

0.754

mrpl12

0.673

mterf4

0.663

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ddx28	fastkd2	ENSCMIP00000045572	ENSCMIP00000012180	Uncharacterized protein.	RAP domain-containing protein.	0.974
ddx28	mterf3	ENSCMIP00000045572	ENSCMIP00000006216	Uncharacterized protein.	Uncharacterized protein.	0.832
ddx28	mterf4	ENSCMIP00000045572	ENSCMIP00000028844	Uncharacterized protein.	mTERF domain-containing protein 2-like protein.	0.654
ddx28	polrmt	ENSCMIP00000045572	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.617
ddx28	ptcd1	ENSCMIP00000045572	ENSCMIP00000042557	Uncharacterized protein.	Uncharacterized protein.	0.867
ddx28	trub2	ENSCMIP00000045572	ENSCMIP00000037053	Uncharacterized protein.	TruB_N domain-containing protein.	0.946
fastkd2	ddx28	ENSCMIP00000012180	ENSCMIP00000045572	RAP domain-containing protein.	Uncharacterized protein.	0.974
fastkd2	mterf3	ENSCMIP00000012180	ENSCMIP00000006216	RAP domain-containing protein.	Uncharacterized protein.	0.975
fastkd2	mterf4	ENSCMIP00000012180	ENSCMIP00000028844	RAP domain-containing protein.	mTERF domain-containing protein 2-like protein.	0.445
fastkd2	ptcd1	ENSCMIP00000012180	ENSCMIP00000042557	RAP domain-containing protein.	Uncharacterized protein.	0.961
fastkd2	rcc1l	ENSCMIP00000012180	ENSCMIP00000027930	RAP domain-containing protein.	Uncharacterized protein.	0.695
fastkd2	trub2	ENSCMIP00000012180	ENSCMIP00000037053	RAP domain-containing protein.	TruB_N domain-containing protein.	0.981
mrpl12	mterf3	ENSCMIP00000048716	ENSCMIP00000006216	Uncharacterized protein.	Uncharacterized protein.	0.673
mrpl12	mterf4	ENSCMIP00000048716	ENSCMIP00000028844	Uncharacterized protein.	mTERF domain-containing protein 2-like protein.	0.676
mrpl12	polrmt	ENSCMIP00000048716	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.829
mrpl12	tfam	ENSCMIP00000048716	ENSCMIP00000047498	Uncharacterized protein.	Uncharacterized protein.	0.800
mterf3	ddx28	ENSCMIP00000006216	ENSCMIP00000045572	Uncharacterized protein.	Uncharacterized protein.	0.832
mterf3	fastkd2	ENSCMIP00000006216	ENSCMIP00000012180	Uncharacterized protein.	RAP domain-containing protein.	0.975
mterf3	mrpl12	ENSCMIP00000006216	ENSCMIP00000048716	Uncharacterized protein.	Uncharacterized protein.	0.673
mterf3	mterf4	ENSCMIP00000006216	ENSCMIP00000028844	Uncharacterized protein.	mTERF domain-containing protein 2-like protein.	0.663