STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191373Uncharacterized protein. (627 aa)    
Predicted Functional Partners:
rapgef1
Uncharacterized protein.
    
 0.969
sh2b2
PH domain-containing protein.
    
 0.966
met
Uncharacterized protein.
   
 0.958
ENSCMIP00000043212
Sema domain-containing protein.
   
 0.958
mst1r
Protein kinase domain-containing protein.
   
 0.958
sh3kbp1
Uncharacterized protein.
    
 0.947
fgfr2
Fibroblast growth factor receptor.
    
 0.936
pdgfra
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.936
igf1r
Tyrosine-protein kinase receptor.
    
 0.933
smurf2
E3 ubiquitin-protein ligase.
    
 0.921
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.