STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191374Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
ENSCMIP00000005788
PRKCSH_1 domain-containing protein.
   
 0.651
Prkcsh
EF-hand domain-containing protein.
   
 0.651
dnajc10
Uncharacterized protein.
   
 0.516
LOC103177258
Calnexin.
    
 0.446
canx
Calnexin.
    
 0.446
clgn
Calnexin-like protein.
    
 0.446
gne
Epimerase_2 domain-containing protein.
  
 
 0.442
Gyg2
Uncharacterized protein.
     
 0.409
pygb
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.409
gyg1
Uncharacterized protein.
     
 0.409
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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