Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ap3d1Adaptin_N domain-containing protein. (1193 aa)    
Predicted Functional Partners:
ap3b1
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 0.993
ap3m2
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.990
ap3m1
Adaptor-related protein complex 3, mu 1 subunit; Belongs to the adaptor complexes medium subunit family.
   
 0.990
ap3s1
Clat_adaptor_s domain-containing protein.
    
 0.976
ap3s2
Clat_adaptor_s domain-containing protein.
    
 0.976
ap3b2
AP-3 complex subunit beta.
   
 0.960
vps41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
   
 
 0.916
gak
Uncharacterized protein.
   
 0.868
ap2m1
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.842
ap2s1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.828
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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