STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191382Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
plcb2
Phosphoinositide phospholipase C.
 
   
  0.936
LOC103191092
PH_14 domain-containing protein.
 
     0.920
LOC103171709
Phosphoinositide phospholipase C.
 
      0.900
plcz1
Phosphoinositide phospholipase C.
 
 
 
  0.896
LOC103189708
Phosphoinositide phospholipase C.
 
 
 
  0.820
plcd4
Phosphoinositide phospholipase C.
 
 
 
  0.754
LOC103182067
Uncharacterized protein.
    
 0.621
LOC103182068
Uncharacterized protein.
    
 0.607
gnaq
Uncharacterized protein.
    
 0.607
gna14
Uncharacterized protein.
    
 0.607
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.