STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Col22a1LAM_G_DOMAIN domain-containing protein. (320 aa)    
Predicted Functional Partners:
ENSCMIP00000006447
VWFA domain-containing protein.
 
 
  0.949
ENSCMIP00000006455
Uncharacterized protein.
 
  
  0.913
ENSCMIP00000006444
VWFA domain-containing protein.
 
  
  0.853
wdr90
Uncharacterized protein.
   
 0.817
ENSCMIP00000041032
Uncharacterized protein.
 
  
 0.770
ENSCMIP00000039319
annotation not available
 
 
 0.769
ENSCMIP00000045685
Uncharacterized protein.
 
  
 0.731
LOC103184764
Uncharacterized protein.
   
 0.684
mysm1
Uncharacterized protein.
    
 0.684
ripk4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.682
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.