Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oaz1Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.996
azin1
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.989
Rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
  
 0.878
eef1g
Uncharacterized protein; Belongs to the GST superfamily.
   
  
 0.847
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
  
 0.817
tpt1
Translationally-controlled tumor protein-like isoform 1; Belongs to the TCTP family.
   
    0.806
eif5a2
Eukaryotic translation initiation factor 5A.
   
  
 0.778
psma3
Proteasome subunit alpha type.
   
 
 0.741
psmc3
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.735
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
    0.725
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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