glp2r protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

glp2r

Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (457 aa)

Predicted Functional Partners:

gcg

0.969

LOC103176370

0.705

gnb4

0.642

ENSCMIP00000010316

0.642

gnb1

0.642

crh

0.600

gnb5

0.574

rcvrn

0.540

ENSCMIP00000017983

0.537

dhrs7c

0.535

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000010316	ENSCMIP00000017983	ENSCMIP00000010316	ENSCMIP00000017983	WD_REPEATS_REGION domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.842
ENSCMIP00000010316	LOC103176370	ENSCMIP00000010316	ENSCMIP00000016262	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the peptidase S9B family.	0.764
ENSCMIP00000010316	crh	ENSCMIP00000010316	ENSCMIP00000000486	WD_REPEATS_REGION domain-containing protein.	Corticoliberin.	0.488
ENSCMIP00000010316	gcg	ENSCMIP00000010316	ENSCMIP00000014233	WD_REPEATS_REGION domain-containing protein.	Glucagon; Glucagon plays a key role in glucose metabolism and homeostasis. Regulates blood glucose by increasing gluconeogenesis and decreasing glycolysis.	0.764
ENSCMIP00000010316	glp2r	ENSCMIP00000010316	ENSCMIP00000006502	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.642
ENSCMIP00000010316	gnb5	ENSCMIP00000010316	ENSCMIP00000047205	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.492
ENSCMIP00000017983	ENSCMIP00000010316	ENSCMIP00000017983	ENSCMIP00000010316	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	WD_REPEATS_REGION domain-containing protein.	0.842
ENSCMIP00000017983	LOC103176370	ENSCMIP00000017983	ENSCMIP00000016262	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Uncharacterized protein; Belongs to the peptidase S9B family.	0.616
ENSCMIP00000017983	gcg	ENSCMIP00000017983	ENSCMIP00000014233	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Glucagon; Glucagon plays a key role in glucose metabolism and homeostasis. Regulates blood glucose by increasing gluconeogenesis and decreasing glycolysis.	0.616
ENSCMIP00000017983	glp2r	ENSCMIP00000017983	ENSCMIP00000006502	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.537
ENSCMIP00000017983	gnb1	ENSCMIP00000017983	ENSCMIP00000017391	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	WD_REPEATS_REGION domain-containing protein.	0.842
ENSCMIP00000017983	gnb4	ENSCMIP00000017983	ENSCMIP00000004386	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	WD_REPEATS_REGION domain-containing protein.	0.842
ENSCMIP00000017983	gnb5	ENSCMIP00000017983	ENSCMIP00000047205	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	WD_REPEATS_REGION domain-containing protein.	0.987
LOC103176370	ENSCMIP00000010316	ENSCMIP00000016262	ENSCMIP00000010316	Uncharacterized protein; Belongs to the peptidase S9B family.	WD_REPEATS_REGION domain-containing protein.	0.764
LOC103176370	ENSCMIP00000017983	ENSCMIP00000016262	ENSCMIP00000017983	Uncharacterized protein; Belongs to the peptidase S9B family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.616
LOC103176370	dhrs7c	ENSCMIP00000016262	ENSCMIP00000006469	Uncharacterized protein; Belongs to the peptidase S9B family.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.773
LOC103176370	glp2r	ENSCMIP00000016262	ENSCMIP00000006502	Uncharacterized protein; Belongs to the peptidase S9B family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.705
LOC103176370	gnb1	ENSCMIP00000016262	ENSCMIP00000017391	Uncharacterized protein; Belongs to the peptidase S9B family.	WD_REPEATS_REGION domain-containing protein.	0.764
LOC103176370	gnb4	ENSCMIP00000016262	ENSCMIP00000004386	Uncharacterized protein; Belongs to the peptidase S9B family.	WD_REPEATS_REGION domain-containing protein.	0.764
LOC103176370	gnb5	ENSCMIP00000016262	ENSCMIP00000047205	Uncharacterized protein; Belongs to the peptidase S9B family.	WD_REPEATS_REGION domain-containing protein.	0.610