rcvrn protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

rcvrn

Uncharacterized protein. (202 aa)

Predicted Functional Partners:

grk1

0.984

grk7

0.983

rho

0.928

LOC103179120

0.928

LOC103189115

0.838

Cnga1

0.835

grk6

0.783

grk5

0.783

grk4

0.783

LOC103184070

0.783

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cnga1	LOC103179120	ENSCMIP00000025205	ENSCMIP00000002411	Cyclic nucleotide-binding domain-containing protein.	Rhodopsin.	0.599
Cnga1	LOC103189115	ENSCMIP00000025205	ENSCMIP00000047338	Cyclic nucleotide-binding domain-containing protein.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.672
Cnga1	rcvrn	ENSCMIP00000025205	ENSCMIP00000006512	Cyclic nucleotide-binding domain-containing protein.	Uncharacterized protein.	0.835
Cnga1	rho	ENSCMIP00000025205	ENSCMIP00000000427	Cyclic nucleotide-binding domain-containing protein.	Rhodopsin.	0.597
LOC103179120	Cnga1	ENSCMIP00000002411	ENSCMIP00000025205	Rhodopsin.	Cyclic nucleotide-binding domain-containing protein.	0.599
LOC103179120	LOC103184070	ENSCMIP00000002411	ENSCMIP00000040654	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.743
LOC103179120	LOC103189115	ENSCMIP00000002411	ENSCMIP00000047338	Rhodopsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.706
LOC103179120	grk1	ENSCMIP00000002411	ENSCMIP00000020710	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.977
LOC103179120	grk4	ENSCMIP00000002411	ENSCMIP00000040127	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.743
LOC103179120	grk5	ENSCMIP00000002411	ENSCMIP00000022153	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.743
LOC103179120	grk6	ENSCMIP00000002411	ENSCMIP00000001186	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.743
LOC103179120	grk7	ENSCMIP00000002411	ENSCMIP00000014617	Rhodopsin.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.991
LOC103179120	rcvrn	ENSCMIP00000002411	ENSCMIP00000006512	Rhodopsin.	Uncharacterized protein.	0.928
LOC103179120	rho	ENSCMIP00000002411	ENSCMIP00000000427	Rhodopsin.	Rhodopsin.	0.902
LOC103184070	LOC103179120	ENSCMIP00000040654	ENSCMIP00000002411	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Rhodopsin.	0.743
LOC103184070	LOC103189115	ENSCMIP00000040654	ENSCMIP00000047338	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.597
LOC103184070	rcvrn	ENSCMIP00000040654	ENSCMIP00000006512	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Uncharacterized protein.	0.783
LOC103184070	rho	ENSCMIP00000040654	ENSCMIP00000000427	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	Rhodopsin.	0.743
LOC103189115	Cnga1	ENSCMIP00000047338	ENSCMIP00000025205	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Cyclic nucleotide-binding domain-containing protein.	0.672
LOC103189115	LOC103179120	ENSCMIP00000047338	ENSCMIP00000002411	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Rhodopsin.	0.706