Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000006516Uncharacterized protein. (54 aa)    
Predicted Functional Partners:
LOC103180820
GTP_cyclohydroI domain-containing protein.
  
 
 0.712
gch1
GTP_cyclohydroI domain-containing protein.
  
 
 0.712
gchfr
GTP cyclohydrolase 1 feedback regulatory protein.
     
 0.707
spr
Sepiapterin reductase.
  
 
 0.588
ENSCMIP00000036134
Uncharacterized protein.
  
 
 0.588
cars1
tRNA-synt_1e domain-containing protein.
  
  
 0.449
cars2
tRNA-synt_1e domain-containing protein.
  
  
 0.449
LOC103181471
cGMP-dependent protein kinase.
   
  0.447
prkg2
cGMP-dependent protein kinase.
   
  0.447
LOC103190998
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
  0.447
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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