STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpgdUncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)    
Predicted Functional Partners:
fitm1
Uncharacterized protein.
      
 0.588
ENSCMIP00000035187
CS domain-containing protein.
      
 0.552
LOC103186924
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.542
ENSCMIP00000010303
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.538
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.525
hsd17b3
Testosterone 17-beta-dehydrogenase 3.
 
 0.518
LOC103191276
Corticosteroid 11-beta-dehydrogenase isozyme 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.482
mcat
PKS_AT domain-containing protein.
  
 
 0.473
rdh5
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.453
hexb
Beta-hexosaminidase.
     
 0.452
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.