Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pcsk4P/Homo B domain-containing protein; Belongs to the peptidase S8 family. (785 aa)    
Predicted Functional Partners:
mmp15
ZnMc domain-containing protein.
    
 0.892
LOC103190609
ZnMc domain-containing protein.
    
 0.768
f2
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 
 0.742
notch1
Uncharacterized protein.
   
 0.714
ENSCMIP00000012719
Uncharacterized protein.
   
 0.714
ENSCMIP00000012722
Uncharacterized protein.
   
 0.714
proc
Uncharacterized protein.
   
 
 0.709
pros1
Uncharacterized protein.
     
  0.696
rin3
Uncharacterized protein.
      
 0.673
nrp1
Neuropilin; Belongs to the neuropilin family.
      
 0.667
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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