Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103185880Uncharacterized protein. (555 aa)    
Predicted Functional Partners:
rasl10b
Uncharacterized protein.
    
  0.683
Plekhb1
PH domain-containing protein.
    
   0.591
fbxl4
F-box domain-containing protein.
      
 0.588
stpg2
Uncharacterized protein.
      
 0.585
zfp36l1
Uncharacterized protein.
    
 
 0.580
dnal1
Uncharacterized protein.
    
   0.540
rac1
Uncharacterized protein.
    
  0.529
LOC103191021
Uncharacterized protein.
    
  0.529
rhoc
Uncharacterized protein.
    
  0.529
ENSCMIP00000036907
Uncharacterized protein.
    
  0.529
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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