Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103181931Toll/interleukin-1 receptor domain-containing adapter protein. (147 aa)    
Predicted Functional Partners:
LOC103183182
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.575
LOC103176492
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.575
ENSCMIP00000001300
Uncharacterized protein.
   
 0.516
LOC103190377
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.516
aurka
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.516
birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.503
LOC103184356
Cytochrome b-c1 complex subunit 9-like protein.
   
 
 0.487
ndufb9
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 9-like protein; Belongs to the complex I LYR family.
    
   0.469
ndufa13
Uncharacterized protein.
   
   0.462
aven
Uncharacterized protein.
    
 0.458
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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