STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
strn3WD_REPEATS_REGION domain-containing protein. (810 aa)    
Predicted Functional Partners:
cttnbp2nl
CortBP2 domain-containing protein.
   
 
 0.739
mob4
MOB-like protein phocein.
   
 
 0.715
ppp2r1a
Uncharacterized protein.
   
 
 0.703
strip2
Uncharacterized protein.
    
 
 0.663
strip1
Uncharacterized protein.
    
 
 0.663
pdcd10
Uncharacterized protein.
    
 
 0.654
sike1
Uncharacterized protein.
    
 
 0.629
fgfr1op2
Uncharacterized protein.
    
 
 0.629
slmap
Sarcolemmal membrane-associated protein.
    
 0.611
ppp2ca
Serine/threonine-protein phosphatase.
    
 
 0.605
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.