Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gamtRMT2 domain-containing protein. (237 aa)    
Predicted Functional Partners:
gatm
Uncharacterized protein.
    
 0.996
ckmt1b
Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family.
     
 0.967
ckb
Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family.
     
 0.967
LOC103178013
Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family.
     
 0.961
suox
Cytochrome b5 heme-binding domain-containing protein.
   
  
 0.867
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.809
mtg1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
  
 0.728
mat2a
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
   
  
 0.724
gtpbp4
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
    0.716
bysl
Uncharacterized protein.
   
    0.707
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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