STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptf1aBHLH domain-containing protein. (261 aa)    
Predicted Functional Partners:
rbpjl
Uncharacterized protein.
   
 0.709
rbpj
Uncharacterized protein.
   
 0.706
Barhl1
Uncharacterized protein.
   
  
 0.634
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
  
 0.593
pdx1
Homeobox domain-containing protein.
   
 
 0.563
hnf1b
Homeobox domain-containing protein.
     
 0.537
calb1
Uncharacterized protein.
   
  
 0.523
ENSCMIP00000009720
Uncharacterized protein.
   
  
 0.501
prdm13
Uncharacterized protein.
   
 
 0.492
hnf1a
Homeobox domain-containing protein.
     
 0.468
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]