STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103182089Protein kinase domain-containing protein. (385 aa)    
Predicted Functional Partners:
LOC103191064
Uncharacterized protein; Belongs to the calmodulin family.
   
 0.960
calml6
Uncharacterized protein.
   
 0.959
calml4
Uncharacterized protein.
   
 0.926
dcx
Doublecortin.
 
  
 
 0.913
hdac5
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.904
hdac4
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.904
camk4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  
 
0.901
ENSCMIP00000032379
Uncharacterized protein.
 
  
   0.855
mpp1
Uncharacterized protein; Belongs to the MAGUK family.
 
 
 0.845
ENSCMIP00000032413
Uncharacterized protein.
 
  
   0.826
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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